| Protein ZmHAG19 | |
|---|---|
|
ZmHAG19 is a protein in the GNAT family.
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| Information | |
| Coreg Name: | ZmHAG19 |
| Species: | Maize |
| Coreg Family: | GNAT |
| Gene Name(Synonym): | HAGTF19 |
| Uniprot ID: | B6TIB6 |
| Subgenome: | 2 |
Protein ZmHAG19
ZmHAG19 is a protein in the GNAT family.
| Overview of domains present in v5 transcripts | |||
|---|---|---|---|
| PF00583 | PF13508 | PF13673 | |
| Zm00001eb189250_T001 |  | | |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d051663 | DAPseq |  |
sequence | fimo | position |
| Zm00001d051663 | DAPseq |  |
sequence | fimo | position |
| Zm00001d051663 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d051663 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmHAG19 is the regulator
Interactions where ZmHAG19 is the target
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Zm00001eb189250_T001 from maize genome v5
Amino Acid Sequence
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MASTSPEPAAADETIDTIHIRRLECSDHERGFVALLSQLSPCPDLTTSVFATRFAELAAQGDDHIILVAEDPSASDRRIL
ATGCLFVERKFLRGCGKVGHVEDVVVDAAARGRGLGLRIVRRLVEISRDAGCYKVILDCTPELRAYYAKCGFVEKGVQMA
VYF
MASTSPEPAAADETIDTIHIRRLECSDHERGFVALLSQLSPCPDLTTSVFATRFAELAAQGDDHIILVAEDPSASDRRIL
ATGCLFVERKFLRGCGKVGHVEDVVVDAAARGRGLGLRIVRRLVEISRDAGCYKVILDCTPELRAYYAKCGFVEKGVQMA
VYF
MASTSPEPAAADETIDTIHIRRLECSDHERGFVALLSQLSPCPDLTTSVFATRFAELAAQGDDHIILVAEDPSASDRRIL
ATGCLFVERKFLRGCGKVGHVEDVVVDAAARGRGLGLRIVRRLVEISRDAGCYKVILDCTPELRAYYAKCGFVEKGVQMA
VYF
MASTSPEPAAADETIDTIHIRRLECSDHERGFVALLSQLSPCPDLTTSVFATRFAELAAQGDDHIILVAEDPSASDRRIL
ATGCLFVERKFLRGCGKVGHVEDVVVDAAARGRGLGLRIVRRLVEISRDAGCYKVILDCTPELRAYYAKCGFVEKGVQMA
VYF
MASTSPEPAAADETIDTIHIRRLECSDHERGFVALLSQLSPCPDLTTSVFATRFAELAAQGDDHIILVAEDPSASDRRIL
ATGCLFVERKFLRGCGKVGHVEDVVVDAAARGRGLGLRIVRRLVEISRDAGCYKVILDCTPELRAYYAKCGFVEKGVQMA
VYF
MASTSPEPAAADETIDTIHIRRLECSDHERGFVALLSQLSPCPDLTTSVFATRFAELAAQGDDHIILVAEDPSASDRRIL
ATGCLFVERKFLRGCGKVGHVEDVVVDAAARGRGLGLRIVRRLVEISRDAGCYKVILDCTPELRAYYAKCGFVEKGVQMA
VYF
MASTSPEPAAADETIDTIHIRRLECSDHERGFVALLSQLSPCPDLTTSVFATRFAELAAQGDDHIILVAEDPSASDRRIL
ATGCLFVERKFLRGCGKVGHVEDVVVDAAARGRGLGLRIVRRLVEISRDAGCYKVILDCTPELRAYYAKCGFVEKGVQMA
VYF
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF00583 |
|
| PF13508 |
|
| PF13673 |
|
| Hover here to show all domains | |
Nucleotide Sequence
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ATCTTATCATTTTTACTGAAAATTA...
ATCTTATCATTTTTACTGAAAATTAAAAAACTTGAAAACGAAGTTGTGCTAAATTAACGATGTTATATATAATTAACTTATTAATGTAATGATATATGTAAGTCGTTCAAATTAATTCTTCGTGATAGTATGTGATACTATAGGTGTGATTAGCTCAACGACTTTTTCACATTTTTCACATCTGAATCAACGCACCCTGTGCCCGGTGCCGCCGACCCAAATGGCATCCACCTCGCCGGAACCCGCCGCCGCCGACGAAACTATCGACACCATCCACATCCGTCGCCTAGAGTGTTCCGACCACGAGAGGGGCTTCGTCGCCCTTCTCTCCCAGCTCTCCCCCTGCCCGGACCTCACCACATCCGTGTTCGCCACGCGCTTCGCCGAGCTCGCGGCGCAGGGCGACGACCACATCATCCTCGTGGCCGAGGACCCCTCCGCCTCGGACCGGCGGATCCTCGCGACAGGGTGCCTCTTCGTGGAGCGTAAGTTCCTGCGAGGCTGCGGCAAGGTGGGGCACGTGGAGGACGTGGTGGTCGATGCCGCCGCGCGCGGCAGGGGTCTCGGGCTCCGCATCGTGCGCCGCCTCGTGGAGATCTCCAGGGACGCCGGCTGCTACAAGGTCATCCTCGACTGCACCCCCGAGCTGCGTGCCTACTATGCCAAGTGCGGATTCGTGGAGAAGGGTGTCCAGATGGCCGTCTACTTCTGAGTTCTGATCTAGAGATTCATTGCTAAGGAGTGATGGCATATGCGCTCGTTCTGCTTAAAGACCCCATCTAAATTTGCCGTGAATTTTGGCAATTGAGAAGCTTCCTTAGAACTGTATTAATCCTTTATAAGAACCGATAGATGTTCATTTTTGTCTTCTAATTATGTTTGGCGAGGCCATTATGAATAATGTTCCCCACTTCTGTTCCCGTTTGCATCATCAAACGAGATATTAGCCTGTTTGTTCCGGATTCCAAACGCTTCGGCTGAACTCGCTTATTTGAATCATTTAAATCAATGTGAATATAAAATTTGCTGAGTCATCGTGATAAAAGAAATTTGTTGCTTTCTAGACCCTAAAATCT
GRMZM2G011624_T01 from maize genome v3
Amino Acid Sequence
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MASTSPEPAAADETIDTIHIRRLECSDHERGFVALLSQLSPCPDLTTSVFATRFAELAAQGDDHIILVAEDPSASDRRIL
ATGCLFVERKFLRGCGKVGHVEDVVVDAAARGRGLGLRIVRRLVEISRDAGCYKVILDCTPELRAYYAKCGFVEKGVQMA
VYF
Nucleotide Sequence
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ATCTTATCATTTTTACTGAAAATTA...
ATCTTATCATTTTTACTGAAAATTAAAAAACTTGAAAACGAAGTTGTGCTAAATTAACGATGTTATATATAATTAACTTATTAATGTAATGATATATGTAAGTCGTTCAAATTAATTCTTCGTGATAGTATGTGATACTATAGGTGTGATTAGCTCAACGACTTTTTCACATTTTTCACATCTGAATCAACGCACCCTGTGCCCGGTGCCGCCGACCCAAATGGCATCCACCTCGCCGGAACCCGCCGCCGCCGACGAAACTATCGACACCATCCACATCCGTCGCCTAGAGTGTTCCGACCACGAGAGGGGCTTCGTCGCCCTTCTCTCCCAGCTCTCCCCCTGCCCGGACCTCACCACATCCGTGTTCGCCACGCGCTTCGCCGAGCTCGCGGCGCAGGGCGACGACCACATCATCCTCGTGGCCGAGGACCCCTCCGCCTCGGACCGGCGGATCCTCGCGACAGGGTGCCTCTTCGTGGAGCGTAAGTTCCTGCGAGGCTGCGGCAAGGTGGGGCACGTGGAGGACGTGGTGGTCGATGCCGCCGCGCGCGGCAGGGGTCTCGGGCTCCGCATCGTGCGCCGCCTCGTGGAGATCTCCAGGGACGCCGGCTGCTACAAGGTCATCCTCGACTGCACCCCCGAGCTGCGTGCCTACTATGCCAAGTGCGGATTCGTGGAGAAGGGTGTCCAGATGGCCGTCTACTTCTGAGTTCTGATCTAGAGATTCATTGCTAAGGAGTGATGGCATATGCGCTCGTTCTGCTTAAAGACCCCATCTAAATTTGCCGTGAATTTTGGCAATTGAGAAGCTTCCTTAGAACTGTATTAATCCTTTATAAGAACCGATAGATGTTCATTTTTGTCTTCTAATTATGTTTGGCGAGGCCATTATGAATAATGTTCCCCACTTCTGTTCCCGTTTGCATCATCAAACGAGATATTAGCCTGTTTGTTCCGGATTCCAAACGCTTCGGCTGAACTCGCTTATTTGAATCATTTAAATCAATGTGAATATAAAATTTGCTGAGTCATCGTGATAAAAGAAATTTGTTGCTTTCTAGACCCTAAAATCT
Zm00001d051663_T001 from maize genome v4
Amino Acid Sequence
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MASTSPEPAAADETIDTIHIRRLECSDHERGFVALLSQLSPCPDLTTSVFATRFAELAAQGDDHIILVAEDPSASDRRIL
ATGCLFVERKFLRGCGKVGHVEDVVVDAAARGRGLGLRIVRRLVEISRDAGCYKVILDCTPELRAYYAKCGFVEKGVQMA
VYF
Nucleotide Sequence
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ATGGCATCCACCTCGCCGGAACCCG...
ATGGCATCCACCTCGCCGGAACCCGCCGCCGCCGACGAAACTATCGACACCATCCACATCCGTCGCCTAGAGTGTTCCGACCACGAGAGGGGCTTCGTCGCCCTTCTCTCCCAGCTCTCCCCCTGCCCGGACCTCACCACATCCGTGTTCGCCACGCGCTTCGCCGAGCTCGCGGCGCAGGGCGACGACCACATCATCCTCGTGGCCGAGGACCCCTCCGCCTCGGACCGGCGGATCCTCGCGACAGGGTGCCTCTTCGTGGAGCGTAAGTTCCTGCGAGGCTGCGGCAAGGTGGGGCACGTGGAGGACGTGGTGGTCGATGCCGCCGCGCGCGGCAGGGGTCTCGGGCTCCGCATCGTGCGCCGCCTCGTGGAGATCTCCAGGGACGCCGGCTGCTACAAGGTCATCCTCGACTGCACCCCCGAGCTGCGTGCCTACTATGCCAAGTGCGGATTCGTGGAGAAGGGTGTCCAGATGGCCGTCTACTTCTGA
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